By default, we will perform de-multiplexing and base-calling and return fastq files. BCL files are also available for download, though most researchers choose not to take them since they require a lot of storage space. For samples generated using most kits from 10x Genomics, we will provide demultiplexed fastq files and count results. 

Data analysis will begin automatically after your run finishes and can take up to two days. Once the analysis is complete, we will email a link for you to retrieve your files. For help accessing data, see these instructions.

We keep data for 90 days after the analysis is complete.

We recommend that all FAS researchers meet with the Informatics team before submitting samples. They offer tools, training, and support to enable additional analysis.